I recently bought an NVIDIA Jetson Nano Developer Kit to fiddle around with things like MicroShift or TensorFlow. The board is typically used with L4T (Linux for Tegra) based on Ubuntu 18.04. Fedora can also be installed, although not all drivers (for example for the GPU) are available yet. So after properly updating the system with the latest packages, when starting a container using the
nvidia runtime, I got the following error:
docker run -it --rm --runtime nvidia --network host nvcr.io/nvidia/l4t-ml:r32.6.1-py3 [..] docker: Error response from daemon: failed to create shim: OCI runtime create failed: container_linux.go:380: starting container process caused: error adding seccomp filter rule for syscall clone3: permission denied: unknown.
The root cause for this is an incompatibility between the latest versions of
containerd and the NVIDIA packages.
So to resolve this issue, downgrade the following two packages:
containerdto version 1.5.2 (containerd_1.5.2-0ubuntu1~18.04.3_arm64.deb)
docker.ioto version 19.03.6 (docker.io_19.03.6-0ubuntu1~18.04.3_arm64.deb)
Download these packages and install them using
apt install and then block them from upgrading using
apt install ./containerd_1.5.2-0ubuntu1~18.04.3_arm64.deb ./docker.io_19.03.6-0ubuntu1~18.04.3_arm64.deb apt-mark hold docker.io containerd
Once this is done, restart
docker and then
docker run should work as expected. Other solutions (here) suggest to use the
nvidia.github.io repositories, but that did not work for me as it lead to other issues.